NCI CCR Header
LLMPP logo

Home
Return to the LLMPP Homepage 

Explorer
Interactively explore the figures 

Search
Search the LLMPP Microarray dataset 

Figures
View figures from the paper 

Analysis
Data analysis methods and links

Supplement
View additional tables & figures 

Help
Get help with interpretation of the data 

Download
Download the primary data 

Authors
List of authors 
 

LLMPP Web Supplement

 

Data Download Area

Data for Figures:

  • Data for the clusters presented within the paper are available here, all as text tab-delimited cluster data.  These downloadable data files can be conveniently browsed on IBM PC compatible computers using TreeView, a publicly available software package written by Michael Eisen.

DLCL Survival/IPI:


Raw Data:

  • Raw data for all Lymphochip microarrays used are available here.  For each microarray, two scan files were generated, one for each fluorescence emission wavelength corresponding to the fluorophor used in the reverse transcription labeling reaction (i.e., Cy3-dUTP = 532 nm, Cy5-dUTP = 635 nm).  Image analysis for each pair of arrays was performed on IBM PC compatible computers using ScanAlyze, and included a semi-manual gridding process whereby the spots are identified and stored in a grid file (ScanAlyze SAG file).  The extracted data files are available as text tab-delimited DAT files (ScanAlyze output), and you can find descriptions of the columns here, as well as in the ScanAlyze User Manual (in Adobe Acrobat PDF Format). 

List of cDNA clones on the Lymphochip:


[ Home | Explore | Search | Figures | Analysis | Supplement | Help | Authors ]


For questions and/or comments on this website, please send e-mail to Ash Alizadeh.

BIMAS logo NIH BioInformatics support provided by BIMAS/CBEL/CIT.
We can be contacted by email.
Privacy Policy.